Hello,
I am discovering Qlustar (being a ROCKS admin since a long time).
My first test with Qlustar 10.x was sucessful; qluman-qt started correctly, I browsed the windows with no problem.
I reinstalled everything from scratch to run Qlustar 11, installed qluman-qt with apt install and using the singularity image : both version give the error
(...)
File "/usr/lib/python3/dist-packages/sqlalchemy/engine/default.py", line 393, in connect
return self.dbapi.connect(*cargs, **cparams)
sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) unable to open database file
I wonder why SQLITE3 is invoqued because during the installation, there was a prompt for mysql root's password.
MariaDB is running, and a Qlustar Database exists and populated :
mysql -p
Enter password:
Welcome to the MariaDB monitor. Commands end with ; or \g.
Your MariaDB connection id is 48
Server version: 10.1.41-MariaDB-0ubuntu0.18.04.1 Ubuntu 18.04
Copyright (c) 2000, 2018, Oracle, MariaDB Corporation Ab and others.
Type 'help;' or '\h' for help. Type '\c' to clear the current input statement.
MariaDB [(none)]> use Qlustar;
Reading table information for completion of table and column names
You can turn off this feature to get a quicker startup with -A
Database changed
MariaDB [Qlustar]> select * from Users;
+----+-------+--------+---------------+----------------+------------------------------------------------+---------------------+
| id | name | passwd | real_name | email | info | last_changed |
+----+-------+--------+---------------+----------------+------------------------------------------------+---------------------+
| 1 | admin | $......| Admin account | root@localhost | Admin user | 2019-11-05 08:49:36 |
| 2 | root | $......| cli user | root@beosrv-c | user used by the qluman command line interface | 2019-10-30 10:57:10 |
+----+-------+--------+---------------+----------------+------------------------------------------------+---------------------+
2 rows in set (0.00 sec)
Any clue will be welcome !
Thanks
Alain
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Dr Alain EMPAIN, Bioinformatics
University of Liège
CHU, GIGA-R (B34, +1), alain.empain@uliege.be
Rue des Martyrs, 11 B-4550 Nandrin
Mobile: +32 497 701764 HOME:+32 85 512341